Genomic epidemiology unveils the dynamics and spatial corridor behind the Yellow Fever virus outbreak in Southern Brazil.

Despite the considerable morbidity and mortality of yellow fever virus (YFV) infections in Brazil, our understanding of disease outbreaks is hampered by limited viral genomic data. Here, through a combination of phylogenetic and epidemiological models, we reconstructed the recent transmission history of YFV within different epidemic seasons in Brazil. A suitability index based on the highly domesticated Aedes aegypti was able to capture the seasonality of reported human infections. Spatial modeling revealed spatial hotspots with both past reporting and low vaccination coverage, which coincided with many of the largest urban centers in the Southeast. Phylodynamic analysis unraveled the circulation of three distinct lineages and provided proof of the directionality of a known spatial corridor that connects the endemic North with the extra-Amazonian basin. This study illustrates that genomics linked with eco-epidemiology can provide new insights into the landscape of YFV transmission, augmenting traditional approaches to infectious disease surveillance and control.

Capture of Alouatta guariba clamitans for the surveillance of sylvatic yellow fever and zoonotic malaria: Which is the best strategy in the tropical Atlantic Forest?

Howler monkey capture is an arduous and expensive task requiring trained and specialized professionals. We compared strategies and methods to most efficiently capture Alouatta guariba clamitans in remnants of the Atlantic Forest in Rio de Janeiro and its bordering states of Minas Gerais and São Paulo. We tested whether or not the success of expeditions in the forest with anesthetic darts, nets, and baited traps differed with and without the support of an information network, a contact chain built with key institutions and inhabitants to continuously monitor howler monkey presence. The influence of forest conditions (vegetation type and fragment size) upon darting success was also evaluated. We captured 24 free-living A. guariba clamitans. No howler monkey was caught with traps, probably due to the predominantly folivore feeding to high local plant diversity providing a great variety of food options. Captures based on an information network were significantly more efficient in terms of numbers of caught monkeys than without it. Captures with darts were considerably more efficient when performed in semideciduous forests and small forest fragments as opposed to ombrophilous forests or large woods. Although we walked great distances within the forest searching for howler monkeys, all but one animal were captured at the forest fringes. Hindrances to search and the darting method in the Atlantic Forest, for example, the steep terrain, high tree canopies, hunt pressure, and low A. guariba clamitans population density, were mitigated with the use of the information network in this monkey capture. Moreover, the information network enhanced the surveillance of zoonotic diseases, which howler monkeys and other nonhuman primates are reservoirs in Brazil, such as malaria and yellow fever.

Epizootias em primatas não humanos durante reemergência do vírus da febre amarela no Brasil, 2007 a 2009 / Epizootics in nonhuman primates during reemergence of yellow fever virus in Brazil, 2007 to 2009

Objetivo: descrever e analisar a mudança do perfil epidemiológico da febre amarela silvestre no Brasil – que passa a ocorrer fora da Amazônia – a partir de 1999, quando a detecção do vírus em primatas permitiu a aplicação oportuna de novas medidas de vigilância. Metodologia: este estudo faz uma análise descritiva das epizootias em primatas notificadas ao Ministério da Saúde (MS) entre 2007 e 2009; para captação dos dados, foram utilizadas a Ficha de Notificação de Epizootia do Sistema de Informação de Agravos de Notificação (Sinan) e planilha de notificação diária. Resultados: No período, foram notificadas 1.971 epizootias em primatas, sendo 73 no ano de 2007, 1.050 em 2008 e 848 em 2009; essas epizootias ocorreram em 520 municípios de 19 estados; do total de epizootias notificadas, 209 (10,6 por cento) foram confirmadas para febre amarela. Conclusão: as informações aqui discutidas são fundamentais para o aperfeiçoamento da vigilância e a consolidação da notificação de epizootias em primatas, como instrumento de prevenção de casos humanos da doença.

Objective: to describe and analyze the change in the epidemiological profile of sylvatic yellow fever – whose cases began to occur outside the Amazon region, in Brazil – from 1999, when the detection of the virus in primates has led to the timely implementation of new surveillance measures. Methodology: this study is a descriptive analysis of epizootics in primates notified to the Ministry of Health between 2007 and 2009; data were captured using the Epizootic Notification Form of the Brazilian Information System for Notifiable Diseases (Sinan) and daily reporting spreadsheet. Results: from 1,971 epizootics reported during the period, 73 occurred in 2007, 1,050 in 2008, and 848 in 2009; and 209 (10.6 per cent) were confirmed for yellow fever; these epizootics have been registered in 520 municipalities of 19 states. Conclusion: the information discussed herein is fundamental for improving the surveillance and consolidating the notification of epizootics in primates, as a tool for preventing human cases of the disease.